CSTB team: Complex Systems and Translational Bioinformatics

Pierre Collet

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Pierre Collet 2022.jpg

  • Full Professor in Computer Science in the Engineering, Computer Sciences and Imaging laboratory (UMR CNRS 7357) of the Strasbourg University in Strasbourg (East of France) since Sept. 2007.
  • Promoted to Classe Exceptionnelle (Distinguished Professor) on 01/09/2016, last step on 01/09/2019.
  • Now at ITISB (Instituto de Tecnología para la Innovación en Salud y Bienestar) of Andrés Bello Universidad in Chile.
  • Co-founder (with Olivier Poch and Julie Thompson) and co-head of the CSTB Complex Systems and Translational Bioinformatics team of ICUBE laboratory since 2016.
  • Co-founder (in 2016 with Philippe Turek, Jean-Marc Planeix and Eckhart Hoetzel, under the presidency of Alain Beretz) and operational manager of UFAZ Franco-Azerbaijani University .
  • Co-founder (in 2014, with Paul Bourgine, President and Prof. Cyrille Bertelle of Le Havre University) and co-coordinator of the CS-DC UNESCO UniTwin a network of around 150 Universities in the world that are developing teaching and science of Complex Systems in around 40 countries.
  • Head of the international E-laboratory on Complex Computational Ecosystems (ECCE).
  • Coordinator of the Strasbourg Complex Systems Digital Campus CS-DC.
  • Former head of the Departement of Computer Science of Strasbourg University from 2011 to 2015.
  • Head of the FDBT Fouille de Données et Bioinformatique Théorique then BFO Bioinformatique, Fouille de données et Optimisation research teams, of the LSIIT laboratory UMR 7005.
  • President of the French Evolution Artificielle society from 2003 to 2007.
  • Co-editor of Eurasia Journal of Mathematics, Science and Technology Education,
  • Associate Editor of the Journal of Artificial Evolution and Applications (Stefano Cagnoni, chief editor),
  • Erdös number: 3 thanks to the co-edition of LNCS volume 3871 with the late Pierre Liardet, a great mathematician and a great person.

Quick bio

Following a Master's degree in Operating Systems at the Paris VI University in 1990 and a research internship at INRIA Rocquencourt on the kernels of distributed object-oriented operating systems, Pierre Collet worked briefly as assistant manager of an airline company called Euroways, in 1992 and 1993. After a PhD thesis of the Orsay University, in Computer Aided Surgery through virtual reality between 1994 and 1997, he went on a post-doc internship on artificial evolution and genetic programming in the Fractales Project of INRIA Rocquencourt, managed by Jacques Lévy-Véhel and Evelyne Lutton. From 2000 to 2003, he was researcher in the Artificial Evolution and Learning team of the Center of Applied Maths of the French école Polytechnique (CMAPX), directed by Marc Schoenauer, as a member of the DREAM (Distributed Resource Evolutionary Algorithm Machine) European Project. In Feb. 2003, he became assistant Professor at the Université du Littoral Côte d'Opale in Calais, and defended an habilitation thesis in June 2004. In Sept. 2007, he was appointed full Professor in Strasbourg in the LSIIT lab, as head of the new FDBT team, following the retirement of Jerzy Korczak.

Research interests

Publications within LSIIT since September 2007

List

Current Projects

CIFRE PhD of the Lyon I University, and the Université de Strasbourg.
Starting on: Octobre 2007.
Ph-D Student: Olivier Kuhn
Involved laboratories:
* LIRIS (UMR 5205-CNRS), Université C.B. Lyon I,
* LSIIT (UMR 7005-CNRS), Université Louis Pasteur, Strasbourg.
PhD supervisors:
* Pr. Parisa Ghodous, LIRIS,
* Pr. Pierre Collet, LSIIT.
Industrial partners: Prostep France et Prostep Allemagne.

Former Projects

  • Member of the British (EP/D066174/1) EPSRC project on the emergence of computation in cellular automata, with Andy Adamatzki and Emmanuel Sapin (post-doc), from Oct 2006 to Oct 2007.
  • Scientific director of the French ANR-RNTS project HEVEA (Handicap : EValuation de l'Ecologie Auditive) on the optimisation of cochlear implants fitting, in collaboration with:
    • Service ORL du CHU Avicenne (Bobigny), Pr. Frachet,
    • Centre de Ressources Technologiques INNOTECH (Bobigny).

Teaching

  • Head of the CCI Master's Degree of the Université du Littoral Côte d'Opale from 2003 to 2006.
  • Courses on:
    • Artificial Intelligence,
    • Artificial Evolution,
    • Genetic Programming,
    • operating sytems and computer architecture,
    • algorithmics,
    • programming langages (C, C++, Java).

Projects or internships for 2007 / 2008

  • Projects:

    Personal links

    Contact

    I have the C337 office in the Pôle API building.

    http://en.wikipedia.org/wiki/Flying_Spaghetti_Monster

    Prof. Pierre Collet
    LSIIT - UMR7005
    Pôle API
    Bd Sébastien Brant - BP 10413
    67412 Illkirch cedex
    
    Tel : +33 (0)3 90.24.45.80 
    Fax : +33 (0)3 90.24.44.45 
    E-mail : Pierre.Collet @ Lsiit.U-Strasbg.Fr